Useful Links

Models of Dynamical Systems

Free Books for Python or R

Data Science Courses

Open Science

Starting points for learning about accessibility

Open Science Pre-publication Sites:

Neuroscience Information

DataCamp Cheasheets:

https://www.datacamp.com/tutorial/coding-best-practices-and-guidelines

https://www.datacamp.com/cheatSheet/bash-and-zsh-shell-terminal-basics-cheat-sheet

https://www.datacamp.com/cheatSheet/quarto-cheat-sheet-previously-known-as-r-markdown

https://www.datacamp.com/cheatSheet/the-generative-ai-tools-landscape

https://www.datacamp.com/cheatSheet/reshaping-data-with-pandas-in-python.

https://www.datacamp.com/cheatSheet/text-data-in-python-cheat-sheet

https://www.datacamp.com/cheatSheet/working-with-dates-and-times-in-python-cheat-sheet

https://www.datacamp.com/cheatSheet/python-seaborn-cheat-sheet

https://www.datacamp.com/cheatSheet/scipy-cheat-sheet-linear-algebra-in-python

https://www.datacamp.com/cheatSheet/pandas-cheat-sheet-data-wrangling-in-python

https://www.datacamp.com/cheatSheet/jupyter-notebook-cheat-sheet

https://www.datacamp.com/cheatSheet/matplotlib-cheat-sheet-plotting-in-python

https://www.datacamp.com/cheatSheet/getting-started-with-python-cheat-sheet

https://www.datacamp.com/tutorial/a-beginners-guide-to-chatgpt-api

https://www.datacamp.com/tutorial/r-markdown-tutorial

https://www.datacamp.com/tutorial/what-is-a-confusion-matrix-in-machine-learning

https://www.datacamp.com/tutorial/what-is-hugging-face

https://www.datacamp.com/tutorial/coding-best-practices-and-guidelines

https://www.datacamp.com/tutorial/introduction-to-data-pipelines-for-data-professionals

https://www.datacamp.com/tutorial/a-data-scientists-guide-to-signal-processing

https://www.datacamp.com/tutorial/seeing-like-a-machine-a-beginners-guide-to-image-analysis-in-machine-learning

https://www.datacamp.com/tutorial/introduction-to-convolutional-neural-networks-cnns

https://www.datacamp.com/tutorial/pytorch-vs-tensorflow-vs-keras

https://www.datacamp.com/tutorial/the-cross-entropy-loss-function-in-machine-learning

https://viso.ai/deep-learning/pytorchvideo-video-understanding/

https://www.simplilearn.com/best-ai-tools-for-video-editing-article

AmadeusGPT: a natural language interface for interactive animal behavioral analysis https://neurips.cc/media/PosterPDFs/NeurIPS%202023/72610.png?t=1701780014.8377924

https://pytorch.org/audio/stable/index.html

https://pytorch.org/vision/stable/index.html

Torchvision https://paperswithcode.com/lib/torchvision#:~:text=torchvision-,The%20torchvision%20library%20consists%20of%20popular%20datasets%2C%20model%20architectures%2C%20and,video%20classification%20and%20semantic%20segmentation.

State of the Art https://paperswithcode.com/sota

https://paperswithcode.com/libraries

https://paperswithcode.com/methods

https://github.com/huggingface/transformers

https://huggingface.co/docs/transformers/index

Cran-R Task Views

R Task Views: Tracking Data https://cran.r-project.org/web/views/Tracking.html Carpentries https://datacarpentry.org/rr-version-control/02-git-in-github/index.html

Ten Simple Rules Collection

https://www.reddit.com/r/bioinformatics/comments/12puflj/plos_computational_biology_ten_simple_rules_papers/?rdt=36960

PLOS Computational Biology: filter “undergraduate” https://journals.plos.org/ploscompbiol/search?filterJournals=PLoSCompBiol&filterSubjects=Undergraduates&q=

PLOS Computational Biology: filter “graduate”

Historical Research

Computational Historical Thinking: With Applications in R Lincoln A. Mullen https://dh-r.lincolnmullen.com/